CDS

Accession Number TCMCG057C25647
gbkey CDS
Protein Id XP_018493128.1
Location complement(join(24173560..24173982,24174445..24175305))
Gene LOC108863257
GeneID 108863257
Organism Raphanus sativus

Protein

Length 427aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018637626.1
Definition PREDICTED: pre-mRNA-splicing factor 18-like isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category A
Description Splicing factor Prp18 family protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12817        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000350        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000393        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005682        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008298        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046540        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071020        [VIEW IN EMBL-EBI]
GO:0071021        [VIEW IN EMBL-EBI]
GO:0071025        [VIEW IN EMBL-EBI]
GO:0071027        [VIEW IN EMBL-EBI]
GO:0071028        [VIEW IN EMBL-EBI]
GO:0071030        [VIEW IN EMBL-EBI]
GO:0071033        [VIEW IN EMBL-EBI]
GO:0071048        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097525        [VIEW IN EMBL-EBI]
GO:0097526        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATTTGCTCAGGCAAGAAATTCTGAAGAAAAGACAGTCTCTCTCCGAGGAAGCTGGTGGCATGAAGTTCTACAAACGATCCGAGATCGAGCAGAAGAAACTCCAGAAGCTTCGCGAGGAAGAGCGACGCGAACACGAGCTCAAGGCCCAGCGTAGAGCCTCCGCCTCCGCCGCCGAAGCATCTAGCACCGGTGGTAAGTCATCAACCGATTCATCTGCTCCTGGCTCTTTAACATCGGAGGCAGCAGCAGCTGCGATCACCGCCGATTCTTCCAAATCCCTAGCGGACGAGAGGAACATCGAAACCCTAGCTCTCCCTAAGCAAGAAGTGATTCGACGATTGAGGATCCTCAAGCAGCCGACGACTCTCTTCGGGGAAGACGATCAGGCTCGTCTCGATCGACTCAAGTACGTGTTGAAGGAAGGACTGTTCGAGGTCGATAGCGATGTGACCGACGGGCAGACGAACGATTTCTTGCGTGACATCTCTGAGATGAAGAAGAGGCAGAAGAGTGGGATCATGGGAGATAGGAAGAGGAAGAAGAGTAGAGATGAGAGAGGGAGAGAGGAAGGTGAGAGGAGGGATGATGATGATGATGATGAGCTTAGTGGTGGTGGTGGTGAGTCTAGTGATGTTGATGCTGATAAGGATTTGAAGCGTTTGAAGTCTAATTTCGAGGATCTTTGTGATGAGGATAAGATACTTGTGTTCTACAAGAAGCTGTTGATTGAGTGGAAACAGGAGCTTGATGCTGTGGAGAACACTGAGAGGAGAACTGCTAAAGGGAAGAAGAATGTTGCCACTTTTAAGCAGTGTGCTAGGTATCTTACTCCTCTCTTCAACTTATGCAGGAAGAAGGGTTTGCCATCTGATATTCGTCAAGCTTTAATGGTGATGGTTAAGCACTGCATAAAGCGAGATTACCTCGCTGCGATGGATCACTACATCAAACTAGCCATAGGAAACGCACCATGGCCCATCGGTGTGACTATGGTTGGTATCCACGAGCGTTCTGCGCGAGAGAAGATTCACACCAACAGTGTTGCTCACATCATGAACGACGAGACCACTCGCAAGTATCTTCAGTCGGTTAAAAGATTGATGACGTTCTGCCAGAGACGTTATCCAACTATGCCTTCTAAAGCTGTTGAGTTCAATAGCTTAGCCAACGGAAGTGATTTACAGTCGTTGCTCGCTGAAGAGAGGTACTTTGGTGGTGATCGTGGACAAGTCTCGGAAGAAAGTCCTGTTCGTTTGCTGGTCGCTAGCGTCAGCGACTAG
Protein:  
MDLLRQEILKKRQSLSEEAGGMKFYKRSEIEQKKLQKLREEERREHELKAQRRASASAAEASSTGGKSSTDSSAPGSLTSEAAAAAITADSSKSLADERNIETLALPKQEVIRRLRILKQPTTLFGEDDQARLDRLKYVLKEGLFEVDSDVTDGQTNDFLRDISEMKKRQKSGIMGDRKRKKSRDERGREEGERRDDDDDDELSGGGGESSDVDADKDLKRLKSNFEDLCDEDKILVFYKKLLIEWKQELDAVENTERRTAKGKKNVATFKQCARYLTPLFNLCRKKGLPSDIRQALMVMVKHCIKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHERSAREKIHTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERYFGGDRGQVSEESPVRLLVASVSD